ECOD: domain e3ak1B1

Domain ID e3ak1B1

A: alpha bundles
X: Long alpha-hairpin
H: Fe,Mn superoxide dismutase (SOD), N-terminal domain
T: Fe,Mn superoxide dismutase (SOD), N-terminal domain
F: Sod_Fe_N

UID:	000411305
Type:	Automatic domain
Parent:	e1my6A1
Range:	B:1-88
Ligands:	EDO
PDB:	3ak1
PDB Description:	SUPEROXIDE DISMUTASE [MN/FE]
UniProt:	Q9Y8H8
Hsap BLAST neighbor:	P04179
Species:

Domains in the same chain:

Download Pymol

e3ak1B1	B:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1B2	B:89-213	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C

Domains in the same PDB:

e3ak1A1	A:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1A2	A:89-212	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C
e3ak1B1	B:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1B2	B:89-213	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C
e3ak1C1	C:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1C2	C:89-213	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C
e3ak1D1	D:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1D2	D:89-212	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C

Structural contacts of domain e3ak1B1 of H-group "Fe,Mn superoxide dismutase (SOD), N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ak1A2	B:x,y,z->A:X,Y,Z	Fe,Mn superoxide dismutase (SOD)-C	Interaction Interface Pymol
e3ak1D2	B:X,Y,Z->D:x,y,z	Fe,Mn superoxide dismutase (SOD)-C	Interaction Interface Pymol
e3ak1D1	B:x,y,z->D:-X,Y-1/2,-Z+1	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Interaction Interface Pymol
e3ak1C2	B:X,Y,Z->C:x,y,z	Fe,Mn superoxide dismutase (SOD)-C	Interaction Interface Pymol
e3ak1C1	B:X,Y,Z->C:x,y,z	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Interaction Interface Pymol
e3ak1C1	B:x,y,z->C:-X+1,Y-1/2,-Z	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Interaction Interface Pymol
e3ak1A1	B:x,y,z->A:-X,Y-1/2,-Z+1	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Interaction Interface Pymol
e3ak1D2	B:x,y,z->D:-X,Y-1/2,-Z	Fe,Mn superoxide dismutase (SOD)-C	Interaction Interface Pymol
e3ak1C2	B:x,y,z->C:X,Y-1,Z	Fe,Mn superoxide dismutase (SOD)-C	Interaction Interface Pymol