ECOD: domain e3ak1D2

Domain ID e3ak1D2

A: a+b three layers
X: Fe,Mn superoxide dismutase (SOD)-C
H: Fe,Mn superoxide dismutase (SOD)-C
T: Fe,Mn superoxide dismutase (SOD)-C
F: Sod_Fe_C

UID:	000411310
Type:	Automatic domain
Parent:	e1ix9A2
Range:	D:89-212
Ligands:	EDO
PDB:	3ak1
PDB Description:	SUPEROXIDE DISMUTASE [MN/FE]
UniProt:	Q9Y8H8
Hsap BLAST neighbor:	P04179
Species:

Domains in the same chain:

Download Pymol

e3ak1D1	D:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1D2	D:89-212	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C

Domains in the same PDB:

e3ak1A1	A:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1A2	A:89-212	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C
e3ak1B1	B:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1B2	B:89-213	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C
e3ak1C1	C:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1C2	C:89-213	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C
e3ak1D1	D:1-88	Long alpha-hairpin	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Fe,Mn superoxide dismutase (SOD), N-terminal domain
e3ak1D2	D:89-212	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C	Fe,Mn superoxide dismutase (SOD)-C

Structural contacts of domain e3ak1D2 of H-group "Fe,Mn superoxide dismutase (SOD)-C":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ak1C1	D:x,y,z->C:X,Y,Z	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Interaction Interface Pymol
e3ak1C2	D:x,y,z->C:X,Y,Z	Fe,Mn superoxide dismutase (SOD)-C	Interaction Interface Pymol
e3ak1B2	D:x,y,z->B:X,Y,Z	Fe,Mn superoxide dismutase (SOD)-C	Interaction Interface Pymol
e3ak1B1	D:x,y,z->B:X,Y,Z	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Interaction Interface Pymol
e3ak1A1	D:x,y,z->A:X,Y,Z	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Interaction Interface Pymol
e3ak1B1	D:-X,Y-1/2,-Z->B:x,y,z	Fe,Mn superoxide dismutase (SOD), N-terminal domain	Interaction Interface Pymol
e3ak1C2	D:x,y,z->C:-X,Y-1/2,-Z	Fe,Mn superoxide dismutase (SOD)-C	Interaction Interface Pymol