Domain ID e3axmE4

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: RuBisCO_large
UID: 001175250
Type: Automatic domain
Parent: e5rubA2
Range: E:149-463
Ligands: 6PG MG
PDB: 3axm
PDB Description: RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN
UniProt: P0C512
Species:

Structure of domain e3axmE4

Domains in the same chain:

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e3axmE3 E:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmE4 E:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e3axmA3 A:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmA4 A:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels
e3axmB3 B:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmB4 B:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels
e3axmC3 C:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmC4 C:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels
e3axmD3 D:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmD4 D:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels
e3axmE3 E:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmE4 E:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels
e3axmF3 F:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmF4 F:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels
e3axmG3 G:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmG4 G:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels
e3axmH3 H:12-150 Alpha-beta plaits RuBisCO, large subunit, small (N-terminal) domain RuBisCO, large subunit, small (N-terminal) domain
e3axmH4 H:149-463 TIM beta/alpha-barrel TIM barrels TIM barrels
e3axmS2 S:0-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e3axmT2 T:0-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e3axmU2 U:0-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e3axmV2 V:0-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e3axmW2 W:0-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e3axmX2 X:0-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e3axmY2 Y:0-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit
e3axmZ2 Z:0-123 Reverse ferredoxin RuBisCO, small subunit RuBisCO, small subunit

Structural contacts of domain e3axmE4 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3axmF4 E:X,Y,Z->F:x,y,z TIM barrels Interaction Interface Pymol
e3axmF3 E:X,Y,Z->F:x,y,z RuBisCO, large subunit, small (N-terminal) domain Interaction Interface Pymol
e3axmC3 E:x,y,z->C:X,Y,Z RuBisCO, large subunit, small (N-terminal) domain Interaction Interface Pymol
e3axmC4 E:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e3axmG4 E:X,Y,Z->G:x,y,z TIM barrels Interaction Interface Pymol
e3axmH3 E:X,Y,Z->H:x,y,z RuBisCO, large subunit, small (N-terminal) domain Interaction Interface Pymol
e3axmF4 E:-X+1,Y-1/2,-Z->F:x,y,z TIM barrels Interaction Interface Pymol