Domain ID e3ayhA1

Download files:
  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: RNA_pol_Rpb4
UID: 000143849
Type: Automatic domain
Parent: e1go3F1
Range: A:-4-129
Ligands: SO4
PDB: 3ayh
PDB Description: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9
UniProt: Q9C0Z9
Hsap BLAST neighbor: O75575
Species:

Structure of domain e3ayhA1

Structural contacts of domain e3ayhA1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ayhB1 A:X,Y,Z->B:x,y,z Flavin-binding protein dodecin-like Interaction Interface Pymol
e3ayhB3 A:X,Y,Z->B:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e3ayhB3 A:x,y,z->B:-X+1,-X+Y,-Z+2/3 Nucleic acid-binding proteins Interaction Interface Pymol
e3ayhA1 A:x,y,z->A:Y,X,-Z SAM/DNA-glycosylase Interaction Interface Pymol
e3ayhA1 A:Y,X,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3ayhB3 A:x,y,z->B:-Y+1,X-Y,Z-1/3 Nucleic acid-binding proteins Interaction Interface Pymol
e3ayhA1 A:x,y,z->A:-X+1,-X+Y,-Z+2/3 SAM/DNA-glycosylase Interaction Interface Pymol
e3ayhA1 A:-X+1,-X+Y,-Z+2/3->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3ayhB1 A:Y,X,-Z->B:x,y,z Flavin-binding protein dodecin-like Interaction Interface Pymol