ECOD: domain e3bgfS1

Domain ID e3bgfS1

A: a+b three layers
X: Coronavirus spike protein receptor-binding domain
H: Coronavirus spike protein receptor-binding domain
T: Beta-coronavirus spike protein receptor-binding domain
F: bCoV_S1_RBD

UID:	000353141
Type:	Automatic domain
Parent:	e2ghvC1
Range:	S:323-501
PDB:	3bgf
PDB Description:	Spike protein S1
UniProt:	P59594
Species:

Domains in the same chain:

Download Pymol

e3bgfS1	S:323-501	Coronavirus spike protein receptor-binding domain	Coronavirus spike protein receptor-binding domain	Beta-coronavirus spike protein receptor-binding domain

Domains in the same PDB:

e3bgfA1	A:323-502	Coronavirus spike protein receptor-binding domain	Coronavirus spike protein receptor-binding domain	Beta-coronavirus spike protein receptor-binding domain
e3bgfB1	B:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgfB2	B:114-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgfC1	C:1-108	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgfC2	C:109-211	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgfH1	H:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgfH2	H:114-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgfL1	L:1-108	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgfL2	L:109-212	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgfS1	S:323-501	Coronavirus spike protein receptor-binding domain	Coronavirus spike protein receptor-binding domain	Beta-coronavirus spike protein receptor-binding domain

Structural contacts of domain e3bgfS1 of H-group "Coronavirus spike protein receptor-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3bgfA1	S:x,y,z->A:X,Y,Z	Coronavirus spike protein receptor-binding domain	Interaction Interface Pymol
e3bgfH1	S:X,Y,Z->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3bgfA1	S:X,Y-1,Z->A:x,y,z	Coronavirus spike protein receptor-binding domain	Interaction Interface Pymol
e3bgfL1	S:X,Y,Z->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3bgfC1	S:-X+1/2,Y-1/2,-Z->C:x,y,z	Immunoglobulin-related	Interaction Interface Pymol