ECOD: domain e3bjfA2

Domain ID e3bjfA2

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: PK

UID:	001517793
Type:	Automatic domain
Parent:	e2g50A2
Range:	A:14-116,A:219-396
Ligands:	K MG OXL
PDB:	3bjf
PDB Description:	Pyruvate kinase isozymes M1/M2
UniProt:	P14618
Hsap BLAST neighbor:	P14618
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3bjfA2	A:14-116,A:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3bjfA1	A:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3bjfA3	A:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Domains in the same PDB:

e3bjfA2	A:14-116,A:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3bjfA1	A:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3bjfA3	A:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e3bjfB3	B:14-116,B:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3bjfB4	B:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3bjfB1	B:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e3bjfC2	C:14-116,C:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3bjfC4	C:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3bjfC1	C:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e3bjfD2	D:14-116,D:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3bjfD4	D:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3bjfD1	D:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Structural contacts of domain e3bjfA2 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3bjfC4	A:X,Y,Z->C:x,y,z	RIFT-related	Interaction Interface Pymol
e3bjfC2	A:X,Y,Z->C:x,y,z	TIM barrels	Interaction Interface Pymol
e3bjfC1	A:X,Y,Z->C:x,y,z	PK C-terminal domain-like	Interaction Interface Pymol
e3bjfB3	A:X,Y,Z->B:x,y,z	TIM barrels	Interaction Interface Pymol
e3bjfB1	A:X,Y,Z->B:x,y,z	PK C-terminal domain-like	Interaction Interface Pymol
e3bjfB4	A:x,y,z->B:X,Y-1,Z+1	RIFT-related	Interaction Interface Pymol
e3bjfC4	A:X-1,Y,Z->C:x,y,z	RIFT-related	Interaction Interface Pymol
e3bjfD2	A:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol