Domain ID e3c2pB5

Download files:
  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: vRNAP_dom
UID: 000353519
Type: Automatic domain
Parent: e2po4A5
Range: B:551-597,B:918-1100
PDB: 3c2p
PDB Description: Virion RNA polymerase
UniProt: Q859P9
Species:

Structure of domain e3c2pB5

Domains in the same chain:

Download Pymol

e3c2pB4 B:325-444 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e3c2pB3 B:445-550 inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase
e3c2pB5 B:551-597,B:918-1100 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3c2pB1 B:598-917 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e3c2pA4 A:325-444 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e3c2pA3 A:445-550 inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase
e3c2pA5 A:551-597,A:918-1103 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3c2pA1 A:598-917 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I
e3c2pB4 B:325-444 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e3c2pB3 B:445-550 inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase
e3c2pB5 B:551-597,B:918-1100 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3c2pB1 B:598-917 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Structural contacts of domain e3c2pB5 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3c2pA5 B:X-1,Y,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3c2pA5 B:X-1,Y,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3c2pA5 B:X-1,Y+1,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3c2pA5 B:X-1/2,-Y-5/2,-Z+2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol