Domain ID e3cp8C11

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  • A: alpha arrays
  • X: C-terminal helical domain in tRNA modifying enzyme GidA
  • H: C-terminal helical domain in tRNA modifying enzyme GidA
  • T: C-terminal helical domain in tRNA modifying enzyme GidA
  • F: GIDA_C_1st
UID: 001164933
Type: Automatic domain
Parent: e3cesA3
Range: C:440-543
PDB: 3cp8
PDB Description: TRNA URIDINE 5-CARBOXYMETHYLAMINOMETHYL MODIFICATION ENZYME GIDA
UniProt: Q8KA85
Species:

Structure of domain e3cp8C11

Domains in the same chain:

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e3cp8C9 C:0-194,C:325-439 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3cp8C10 C:195-324 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e3cp8C11 C:440-543 C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA
e3cp8C8 C:544-619 HhH/H2TH SAM/DNA-glycosylase SAM domain-like

Domains in the same PDB:

e3cp8A9 A:0-194,A:325-439 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3cp8A10 A:195-324 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e3cp8A11 A:440-543 C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA
e3cp8A8 A:544-619 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3cp8B9 B:0-194,B:325-439 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3cp8B10 B:195-324 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e3cp8B11 B:440-543 C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA
e3cp8B8 B:544-619 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3cp8C9 C:0-194,C:325-439 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3cp8C10 C:195-324 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e3cp8C11 C:440-543 C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA
e3cp8C8 C:544-619 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3cp8D3 D:0-196,D:327-439 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3cp8D2 D:195-326 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e3cp8D4 D:440-560 C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA C-terminal helical domain in tRNA modifying enzyme GidA

Structural contacts of domain e3cp8C11 of H-group "C-terminal helical domain in tRNA modifying enzyme GidA":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3cesA3 C:-X+1,Y-1/2,-Z+1->D:x,y,z C-terminal helical domain in tRNA modifying enzyme GidA Interaction Interface Pymol
e3cesA3 C:-X+1,Y-1/2,-Z+1->D:x,y,z C-terminal helical domain in tRNA modifying enzyme GidA Interaction Interface Pymol
e3cesA3 C:x,y,z->D:-X+1,Y-1/2,-Z+1 C-terminal helical domain in tRNA modifying enzyme GidA Interaction Interface Pymol
e3cp8A10 C:-X+1,Y-1/2,-Z+1->A:x,y,z FAD-linked reductases-C Interaction Interface Pymol
e3cp8A9 C:-X+1,Y-1/2,-Z+1->A:x,y,z Rossmann-related Interaction Interface Pymol