ECOD: domain e3d2fA9

Domain ID e3d2fA9

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: HSP70

UID:	001184265
Type:	Automatic domain
Parent:	e1bupA1
Range:	A:188-391
Ligands:	ATP MG
PDB:	3d2f
PDB Description:	Heat shock protein homolog SSE1
UniProt:	P32589
Hsap BLAST neighbor:	O95757
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e3d2fA10	A:2-187	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fA9	A:188-391	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fA11	A:392-539	Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), peptide-binding domain
e3d2fA12	A:540-654	immunoglobulin/albumin-binding domain-like	Heat shock protein 70kD (HSP70), C-terminal subdomain	Heat shock protein 70kD (HSP70), C-terminal subdomain

Domains in the same PDB:

e3d2fA10	A:2-187	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fA9	A:188-391	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fA11	A:392-539	Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), peptide-binding domain
e3d2fA12	A:540-654	immunoglobulin/albumin-binding domain-like	Heat shock protein 70kD (HSP70), C-terminal subdomain	Heat shock protein 70kD (HSP70), C-terminal subdomain
e3d2fB1	B:4-188	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fB2	B:189-381	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fC4	C:2-188	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fC3	C:189-389	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fC7	C:390-540	Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), peptide-binding domain	Heat shock protein 70kD (HSP70), peptide-binding domain
e3d2fC8	C:541-655	immunoglobulin/albumin-binding domain-like	Heat shock protein 70kD (HSP70), C-terminal subdomain	Heat shock protein 70kD (HSP70), C-terminal subdomain
e3d2fD1	D:4-188	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3d2fD2	D:189-381	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Structural contacts of domain e3d2fA9 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3d2fB2	A:X,Y,Z->B:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e3d2fB1	A:X,Y,Z->B:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e3d2fC3	A:X-1/2,-Y+3/2,-Z+2->C:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e3d2fB2	A:x,y,z->B:-X+1,Y-1/2,-Z+5/2	Ribonuclease H-like	Interaction Interface Pymol
e3d2fD2	A:X-1/2,-Y+3/2,-Z+2->D:x,y,z	Ribonuclease H-like	Interaction Interface Pymol