Domain ID e3d2fD2

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: HSP70
UID: 000115340
Type: Automatic domain
Parent: e1bupA1
Range: D:189-381
Ligands: MG
PDB: 3d2f
PDB Description: Heat shock 70 kDa protein 1
UniProt: P08107
Hsap BLAST neighbor: P0DMV9
Species: Homo sapiens

Structure of domain e3d2fD2

Domains in the same chain:

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e3d2fD1 D:4-188 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3d2fD2 D:189-381 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3d2fA10 A:2-187 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3d2fA9 A:188-391 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3d2fA11 A:392-539 Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), peptide-binding domain
e3d2fA12 A:540-654 immunoglobulin/albumin-binding domain-like Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain
e3d2fB1 B:4-188 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3d2fB2 B:189-381 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3d2fC4 C:2-188 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3d2fC3 C:189-389 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3d2fC7 C:390-540 Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), peptide-binding domain
e3d2fC8 C:541-655 immunoglobulin/albumin-binding domain-like Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain
e3d2fD1 D:4-188 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3d2fD2 D:189-381 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Structural contacts of domain e3d2fD2 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3d2fC3 D:x,y,z->C:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e3d2fC4 D:x,y,z->C:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e3d2fC8 D:x,y,z->C:X,Y,Z Heat shock protein 70kD (HSP70), C-terminal subdomain Interaction Interface Pymol
e3d2fA12 D:x,y,z->A:-X+3/2,-Y+2,Z-1/2 Heat shock protein 70kD (HSP70), C-terminal subdomain Interaction Interface Pymol
e3d2fA9 D:x,y,z->A:X-1/2,-Y+3/2,-Z+2 Ribonuclease H-like Interaction Interface Pymol