Domain ID e3dbrG1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: Activating enzymes of the ubiquitin-like proteins
  • F: ThiF
UID: 000100095
Type: Automatic domain
Parent: e3vh2A3
Range: G:6-534
PDB: 3dbr
PDB Description: NEDD8-activating enzyme E1 regulatory subunit
UniProt: Q13564
Hsap BLAST neighbor: Q13564
Species: Homo sapiens

Structure of domain e3dbrG1

Domains in the same chain:

e3dbrG1 G:6-534 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins

Domains in the same PDB:

e3dbrA1 A:6-534 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e3dbrB3 B:11-210,B:289-346 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e3dbrB2 B:211-288 Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme
e3dbrB1 B:346-442 beta-Grasp E2-binding domain of E1 E2-binding domain of E1
e3dbrC1 C:6-534 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e3dbrD3 D:11-210,D:289-346 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e3dbrD2 D:211-288 Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme
e3dbrD1 D:346-441 beta-Grasp E2-binding domain of E1 E2-binding domain of E1
e3dbrE1 E:6-534 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e3dbrF3 F:11-210,F:289-346 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e3dbrF2 F:211-288 Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme
e3dbrF1 F:346-441 beta-Grasp E2-binding domain of E1 E2-binding domain of E1
e3dbrG1 G:6-534 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e3dbrH3 H:11-210,H:289-346 Rossmann-like Rossmann-related Activating enzymes of the ubiquitin-like proteins
e3dbrH2 H:211-288 Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme Catalytic cysteine domain in ubiquitin-activating enzyme
e3dbrH1 H:346-441 beta-Grasp E2-binding domain of E1 E2-binding domain of E1
e3dbrI1 I:91-176 beta-Grasp Ubiquitin-related Ubiquitin-like
e3dbrJ1 J:100-176 beta-Grasp Ubiquitin-related Ubiquitin-like
e3dbrK1 K:100-176 beta-Grasp Ubiquitin-related Ubiquitin-like
e3dbrL1 L:99-176 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e3dbrG1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3dbrH2 G:X,Y,Z->H:x,y,z Catalytic cysteine domain in ubiquitin-activating enzyme Interaction Interface Pymol
e3dbrH3 G:X,Y,Z->H:x,y,z Rossmann-related Interaction Interface Pymol
e3dbrC1 G:-X+1,Y-1/2,-Z+1/2->C:x,y,z Rossmann-related Interaction Interface Pymol
e3dbrL1 G:X,Y,Z->L:x,y,z Ubiquitin-related Interaction Interface Pymol
e3dbrE1 G:x,y,z->E:-X+1,Y-1/2,-Z+1/2 Rossmann-related Interaction Interface Pymol
e3dbrC1 G:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol
e3dbrA1 G:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Rossmann-related Interaction Interface Pymol