Domain ID e3df1N1

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: Ribosomal_S14
UID: 000089553
Type: Automatic domain
Parent: e2qalN1
Range: N:1-100
PDB: 3df1
PDB Description:
Hsap BLAST neighbor: O60783
Species:

Structure of domain e3df1N1

Domains in the same chain:

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e3df1N1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e3df1C2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3df1C1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3df1E1 E:9-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3df1E2 E:78-147 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3df1F1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3df1G1 G:11-146 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3df1H1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3df1H2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3df1J1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3df1K1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3df1L1 L:1-118 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3df1N1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3df1O1 O:2-86 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3df1P1 P:1-78 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3df1R1 R:19-73 HTH HTH tri-helical
e3df1T1 T:4-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3df1N1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3df1C2 N:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol
e3df1J1 N:x,y,z->J:X,Y,Z Ribosomal protein S10 Interaction Interface Pymol