Domain ID e3dinA1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: P-loop_SecA
UID: 000169128
Type: Automatic domain
Parent: e1tf5A4
Range: A:441-615
Ligands: ADP BEF
PDB: 3din
PDB Description: Protein translocase subunit secA
UniProt: Q9X1R4
Species:

Structure of domain e3dinA1

Domains in the same chain:

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e3dinA7 A:1-272,A:392-440 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3dinA8 A:272-391 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e3dinA1 A:441-615 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3dinA4 A:616-816 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA

Domains in the same PDB:

e3dinA7 A:1-272,A:392-440 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3dinA8 A:272-391 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e3dinA1 A:441-615 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3dinA4 A:616-816 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA
e3dinB7 B:1-272,B:392-440 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3dinB8 B:272-391 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e3dinB4 B:441-615 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3dinB2 B:616-816 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA
e3dinC2 C:8-41,C:62-423 Preprotein translocase SecY subunit Preprotein translocase SecY subunit Preprotein translocase SecY subunit
e3dinD1 D:10-65 Preprotein translocase SecE subunit Preprotein translocase SecE subunit Preprotein translocase SecE subunit
e3dinE1 E:9-73 Protein-export membrane protein secG Protein-export membrane protein secG Protein-export membrane protein secG
e3dinF2 F:8-41,F:62-423 Preprotein translocase SecY subunit Preprotein translocase SecY subunit Preprotein translocase SecY subunit
e3dinG1 G:10-65 Preprotein translocase SecE subunit Preprotein translocase SecE subunit Preprotein translocase SecE subunit
e3dinH1 H:9-73 Protein-export membrane protein secG Protein-export membrane protein secG Protein-export membrane protein secG

Structural contacts of domain e3dinA1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3dinC2 A:X,Y,Z->C:x,y,z Preprotein translocase SecY subunit Interaction Interface Pymol
e3dinB8 A:x,y,z->B:X-1,Y,Z Pre-protein crosslinking domain of SecA Interaction Interface Pymol
e3dinB4 A:x,y,z->B:X-1,Y,Z P-loop domains-related Interaction Interface Pymol
e3dinC2 A:-X-1,Y-1/2,-Z+1/2->C:x,y,z Preprotein translocase SecY subunit Interaction Interface Pymol