ECOD: domain e3dinB4

Domain ID e3dinB4

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: P-loop_SecA

UID:	000349560
Type:	Automatic domain
Parent:	e1tf5A4
Range:	B:441-615
Ligands:	ADP BEF
PDB:	3din
PDB Description:	Protein translocase subunit secA
UniProt:	Q9X1R4
Species:

Domains in the same chain:

Download Pymol

e3dinB7	B:1-272,B:392-440	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dinB8	B:272-391	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA
e3dinB4	B:441-615	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dinB2	B:616-816	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA

Domains in the same PDB:

e3dinA7	A:1-272,A:392-440	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dinA8	A:272-391	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA
e3dinA1	A:441-615	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dinA4	A:616-816	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA
e3dinB7	B:1-272,B:392-440	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dinB8	B:272-391	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA	Pre-protein crosslinking domain of SecA
e3dinB4	B:441-615	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dinB2	B:616-816	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA	Helical scaffold and wing domains of SecA
e3dinC2	C:8-41,C:62-423	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit
e3dinD1	D:10-65	Preprotein translocase SecE subunit	Preprotein translocase SecE subunit	Preprotein translocase SecE subunit
e3dinE1	E:9-73	Protein-export membrane protein secG	Protein-export membrane protein secG	Protein-export membrane protein secG
e3dinF2	F:8-41,F:62-423	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit
e3dinG1	G:10-65	Preprotein translocase SecE subunit	Preprotein translocase SecE subunit	Preprotein translocase SecE subunit
e3dinH1	H:9-73	Protein-export membrane protein secG	Protein-export membrane protein secG	Protein-export membrane protein secG

Structural contacts of domain e3dinB4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3dinF2	B:X,Y,Z->F:x,y,z	Preprotein translocase SecY subunit	Interaction Interface Pymol
e3dinA8	B:X-1,Y,Z->A:x,y,z	Pre-protein crosslinking domain of SecA	Interaction Interface Pymol
e3dinA1	B:X-1,Y,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol