| UID: | 001192989 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1zodA3 |
| Range: | A:3-143,A:173-341 |
| Ligands: | PLP |
| PDB: | 3dod |
| PDB Description: | ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE |
| UniProt: | P53555 |
| Hsap BLAST neighbor: | P04181 |
| Species: | Bacillus subtilis |
Structure of domain e3dodA2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3dodA2 of H-group "PLP-dependent transferases":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3dodB3 | A:X,Y,Z->B:x,y,z | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e3dodB2 | A:X,Y,Z->B:x,y,z | PLP-dependent transferases | Interaction Interface Pymol |
| e3dodB3 | A:x,y,z->B:X,Y,Z-1 | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e3dodB2 | A:x,y,z->B:X-1,Y,Z | PLP-dependent transferases | Interaction Interface Pymol |
| e3dodB3 | A:x,y,z->B:X-1,Y,Z-1 | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e3dodA2 | A:x,y,z->A:-X+1,Y-1/2,-Z+1 | PLP-dependent transferases | Interaction Interface Pymol |
| e3dodA2 | A:-X+1,Y-1/2,-Z+1->A:x,y,z | PLP-dependent transferases | Interaction Interface Pymol |
| e3dodB2 | A:-X+1,Y-1/2,-Z+1->B:x,y,z | PLP-dependent transferases | Interaction Interface Pymol |
| e3dodA2 | A:x,y,z->A:X-1,Y,Z | PLP-dependent transferases | Interaction Interface Pymol |
| e3dodA2 | A:X-1,Y,Z->A:x,y,z | PLP-dependent transferases | Interaction Interface Pymol |
| e3dodA3 | A:X,Y,Z-1->A:x,y,z | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e3dodB2 | A:x,y,z->B:-X+1,Y-1/2,-Z+1 | PLP-dependent transferases | Interaction Interface Pymol |
