Domain ID e3dodB2

Download files:
  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: Aminotran_3
UID: 001192991
Type: Automatic domain
Parent: e1zodA3
Range: B:4-143,B:173-341
Ligands: PLP
PDB: 3dod
PDB Description: ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE
UniProt: P53555
Hsap BLAST neighbor: P04181
Species: Bacillus subtilis

Structure of domain e3dodB2

Structural contacts of domain e3dodB2 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3dodA2 B:x,y,z->A:X,Y,Z PLP-dependent transferases Interaction Interface Pymol
e3dodA3 B:x,y,z->A:X,Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e3dodA3 B:X,Y,Z-1->A:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e3dodA2 B:X-1,Y,Z->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e3dodA2 B:x,y,z->A:-X+1,Y-1/2,-Z+1 PLP-dependent transferases Interaction Interface Pymol
e3dodA3 B:x,y,z->A:-X+1,Y-1/2,-Z+1 C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e3dodA2 B:-X+1,Y-1/2,-Z+1->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e3dodB3 B:x,y,z->B:X-1,Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e3dodB2 B:x,y,z->B:X-1,Y,Z PLP-dependent transferases Interaction Interface Pymol
e3dodB2 B:X-1,Y,Z->B:x,y,z PLP-dependent transferases Interaction Interface Pymol
e3dodB2 B:x,y,z->B:-X+2,Y-1/2,-Z+2 PLP-dependent transferases Interaction Interface Pymol
e3dodB2 B:-X+2,Y-1/2,-Z+2->B:x,y,z PLP-dependent transferases Interaction Interface Pymol