Domain ID e3dswB1

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  • A: alpha superhelices
  • X: Repetitive alpha hairpins
  • H: alpha/alpha toroid
  • T: alpha/alpha toroid
  • F: Prenyltrans
UID: 000059489
Type: Automatic domain
Parent: e3dssB1
Range: B:7-330
Ligands: CA GER ZN
PDB: 3dsw
PDB Description: Geranylgeranyl transferase type-2 subunit beta
UniProt: Q08603
Hsap BLAST neighbor: P53611
Species: Rattus norvegicus

Structure of domain e3dswB1

Structural contacts of domain e3dswB1 of H-group "alpha/alpha toroid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3dswA1 B:x,y,z->A:X,Y,Z ARM repeat Interaction Interface Pymol
e3dswA1 B:X-1/2,-Y+1/2,-Z->A:x,y,z ARM repeat Interaction Interface Pymol
e3dswA1 B:-X,Y-1/2,-Z+1/2->A:x,y,z ARM repeat Interaction Interface Pymol
e3dswB1 B:x,y,z->B:-X,Y-1/2,-Z+1/2 alpha/alpha toroid Interaction Interface Pymol
e3dswB1 B:-X,Y-1/2,-Z+1/2->B:x,y,z alpha/alpha toroid Interaction Interface Pymol
e3dswA1 B:x,y,z->A:X-1/2,-Y+1/2,-Z ARM repeat Interaction Interface Pymol
e3dswB1 B:x,y,z->B:X-1/2,-Y+1/2,-Z alpha/alpha toroid Interaction Interface Pymol
e3dswB1 B:X-1/2,-Y+1/2,-Z->B:x,y,z alpha/alpha toroid Interaction Interface Pymol