Domain ID e3dv0D4

Download files:
  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: Transket_pyr
UID: 001278212
Type: Automatic domain
Parent: e2r8oA2
Range: D:1-188
Ligands: K PYR TPW
PDB: 3dv0
PDB Description: PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA
UniProt: P21874
Hsap BLAST neighbor: P21953
Species:

Structure of domain e3dv0D4

Domains in the same chain:

Download Pymol

e3dv0D4 D:1-188 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0D3 D:189-324 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like

Domains in the same PDB:

e3dv0A1 A:4-367 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0B4 B:1-188 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0B3 B:189-324 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3dv0C1 C:4-368 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0D4 D:1-188 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0D3 D:189-324 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3dv0E1 E:4-367 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0F4 F:1-188 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0F3 F:189-324 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3dv0G1 G:4-367 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0H4 H:1-188 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3dv0H3 H:189-324 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3dv0I1 I:127-169 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
e3dv0J1 J:129-169 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex

Structural contacts of domain e3dv0D4 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3dv0B4 D:x,y,z->B:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3dv0B3 D:x,y,z->B:X,Y,Z TK C-terminal domain-like Interaction Interface Pymol
e3dv0C1 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3dv0A1 D:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3dv0H4 D:-X,Y-1/2,-Z->H:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol