ECOD: domain e3dzyA2

Domain ID e3dzyA2

A: few secondary structure elements
X: Glucocorticoid receptor-like
H: LIM domain-like
T: LIM domain-like
F: zf-C4

UID:	000350947
Type:	Automatic domain
Parent:	e1dszA1
Range:	A:132-211
Ligands:	ZN
PDB:	3dzy
PDB Description:	Retinoic acid receptor RXR-alpha
UniProt:	P19793
Hsap BLAST neighbor:	P19793
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3dzyA2

Domains in the same chain:

Download Pymol

e3dzyA2	A:132-211	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e3dzyA1	A:212-455	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain

Domains in the same PDB:

e3dzyA2	A:132-211	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e3dzyA1	A:212-455	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e3dzyD2	D:108-195	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e3dzyD1	D:194-477	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain

Structural contacts of domain e3dzyA2 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3dzyD1	A:X,Y,Z->D:x,y,z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e3dzyD2	A:X,Y,Z->D:x,y,z	LIM domain-like	Interaction Interface Pymol
e3dzyA1	A:x,y,z->A:X-1,Y,Z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol