ECOD: domain e3e0dB2

Domain ID e3e0dB2

A: alpha arrays
X: DNA polymerase III finger domain
H: DNA polymerase III finger domain
T: DNA polymerase III finger domain
F: DNA_pol3_finger

UID:	001772385
Type:	Automatic domain
Parent:	e2hpiA3
Range:	B:623-835
Ligands:	DTP
PDB:	3e0d
PDB Description:	DNA polymerase III subunit alpha
UniProt:	Q9XDH5
Species:	Thermus aquaticus

Domain
In chain context
In PDB context

Structure of domain e3e0dB2

Domains in the same chain:

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Domains in the same PDB:

e3e0dA5	A:5-285	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3e0dA4	A:286-622	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e3e0dA3	A:623-835	DNA polymerase III finger domain	DNA polymerase III finger domain	DNA polymerase III finger domain
e3e0dA1	A:836-1012	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3e0dA6	A:1013-1126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3e0dA2	A:1127-1205	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain
e3e0dB4	B:5-285	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3e0dB6	B:286-622	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e3e0dB2	B:623-835	DNA polymerase III finger domain	DNA polymerase III finger domain	DNA polymerase III finger domain
e3e0dB5	B:836-1012	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3e0dB3	B:1013-1126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3e0dB7	B:1127-1205	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain

Structural contacts of domain e3e0dB2 of H-group "DNA polymerase III finger domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3e0dA3	B:x,y,z->A:X,Y,Z	DNA polymerase III finger domain	Interaction Interface Pymol
e3e0dA3	B:x,y,z->A:-X+1,-Y,Z-1/2	DNA polymerase III finger domain	Interaction Interface Pymol
e3e0dA2	B:x,y,z->A:-X+1,-Y,Z-1/2	DNA polymerase III C-terminal domain	Interaction Interface Pymol