Domain ID e3f1f61

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L33
UID: 000354411
Type: Automatic domain
Parent: e2j0161
Range: 6:9-52
Ligands: MG
PDB: 3f1f
PDB Description:
Species:

Structure of domain e3f1f61

Domains in the same chain:

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e3f1f61 6:9-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e3f1f01 0:10-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3f1f11 1:8-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3f1f21 2:1-62 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3f1f31 3:1-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3f1f41 4:36-65 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3f1f51 5:2-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3f1f61 6:9-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3f1f71 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3f1f81 8:2-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3f1fD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3f1fD2 D:127-272 SH3 SH3 SH3
e3f1fF1 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3f1fG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3f1fH1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3f1fH2 H:83-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3f1fI2 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3f1fI1 I:54-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e3f1fK3 K:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3f1fK4 K:72-147 HTH HTH Ribosomal protein L11, C-terminal domain
e3f1fN1 N:25-161 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3f1fO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3f1fR1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3f1fU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3f1fV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3f1fW1 W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3f1fX1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3f1fY1 Y:2-101 SH3 SH3 SH3
e3f1fZ1 Z:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3f1fZ2 Z:93-189 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e3f1f61 of H-group "Rubredoxin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3f1f81 6:X,Y,Z->8:x,y,z Ribosomal protein L35p Interaction Interface Pymol