Domain ID e3f1gX11

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  • A: a+b two layers
  • X: dsRBD-like
  • H: Peptidyl-tRNA hydrolase domain-like
  • T: Peptidyl-tRNA hydrolase domain-like
  • F: Unmapped domains
UID: 001225432
Type: Automatic domain
Parent: e1rq0A4
Range: X:316-378
PDB: 3f1g
PDB Description:
Species:

Structure of domain e3f1gX11

Domains in the same chain:

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e3f1gX12 X:17-122 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e3f1gX9 X:123-226 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e3f1gX10 X:227-315 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e3f1gX11 X:316-378 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like

Domains in the same PDB:

e3f1gC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3f1gC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3f1gE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3f1gE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3f1gF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3f1gG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3f1gH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3f1gH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3f1gJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3f1gK1 K:11-124 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3f1gL1 L:4-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3f1gN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3f1gO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3f1gP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3f1gR1 R:19-88 HTH HTH tri-helical
e3f1gT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3f1gX12 X:17-122 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e3f1gX9 X:123-226 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e3f1gX10 X:227-315 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e3f1gX11 X:316-378 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like

Structural contacts of domain e3f1gX11 of H-group "Peptidyl-tRNA hydrolase domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3f1gL1 X:x,y,z->L:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol