| UID: | 001159072 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1a0iA2 |
| Range: | A:216-421 |
| Ligands: | PO4 |
| PDB: | 3gde |
| PDB Description: | DNA ligase |
| UniProt: | O29632 |
| Hsap BLAST neighbor: | P18858 |
| Species: | Archaeoglobus fulgidus |
Structure of domain e3gdeA5
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3gdeA5 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3gdeA6 | A:-Y-1/2,X-1/2,Z+1/4->A:x,y,z | ATP-dependent DNA ligase DNA-binding domain | Interaction Interface Pymol |
| e3gdeA7 | A:-Y-1/2,X-1/2,Z+1/4->A:x,y,z | ATP-dependent DNA ligase DNA-binding domain | Interaction Interface Pymol |
| e3gdeA7 | A:-X+1/2,Y-1/2,-Z+1/4->A:x,y,z | ATP-dependent DNA ligase DNA-binding domain | Interaction Interface Pymol |
| e3gdeA2 | A:-X+1/2,Y-1/2,-Z+1/4->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
