| UID: | 000137438 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1x9nA1 |
| Range: | A:422-550 |
| Ligands: | PO4 |
| PDB: | 3gde |
| PDB Description: | DNA ligase |
| UniProt: | O29632 |
| Hsap BLAST neighbor: | P18858 |
| Species: | Archaeoglobus fulgidus |
Structure of domain e3gdeA2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3gdeA2 of H-group "Nucleic acid-binding proteins":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3gdeA6 | A:-Y-1/2,X-1/2,Z+1/4->A:x,y,z | ATP-dependent DNA ligase DNA-binding domain | Interaction Interface Pymol |
| e3gdeA7 | A:-Y-1/2,X-1/2,Z+1/4->A:x,y,z | ATP-dependent DNA ligase DNA-binding domain | Interaction Interface Pymol |
| e3gdeA5 | A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/4 | Protein kinase/SAICAR synthase/ATP-grasp | Interaction Interface Pymol |
