Domain ID e3gliE1

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  • A: alpha arrays
  • X: Histone-like
  • H: Histone-related
  • T: AAA+ ATPase lid domain
  • F: HolB_lid
UID: 001837302
Type: Automatic domain
Parent: e1a5tA4
Range: E:166-207
PDB: 3gli
PDB Description: DNA polymerase III subunit delta'
UniProt: P28631
Species:

Structure of domain e3gliE1

Domains in the same chain:

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e3gliE4 E:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliE1 E:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e3gliE3 E:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain

Domains in the same PDB:

e3gliA3 A:1-141 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliA2 A:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e3gliA1 A:211-333 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliB3 B:5-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliB5 B:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3gliB4 B:243-363 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliC3 C:4-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliC5 C:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3gliC4 C:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliD2 D:2-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliD5 D:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3gliD4 D:243-363 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliE4 E:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliE1 E:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e3gliE3 E:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliF3 F:1-141 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliF2 F:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e3gliF1 F:211-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliG5 G:-9-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliG3 G:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3gliG4 G:243-363 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliH3 H:4-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliH5 H:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3gliH4 H:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliI3 I:2-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliI5 I:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e3gliI4 I:243-363 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e3gliJ2 J:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gliJ4 J:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e3gliJ3 J:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain

Structural contacts of domain e3gliE1 of H-group "Histone-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gliD4 E:x,y,z->D:X,Y,Z DNA polymerase III clamp loader subunits, C-terminal domain Interaction Interface Pymol
e3gliH5 E:X-1/2,-Y-1/2,-Z->H:x,y,z Histone-related Interaction Interface Pymol