Domain ID e3gqbA4

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP-synt_ab,ATP-synt_ab_Xtn
UID: 000377829
Type: Automatic domain
Parent: e3i72A2
Range: A:70-111,A:184-436
PDB: 3gqb
PDB Description: V-type ATP synthase alpha chain
UniProt: Q56403
Hsap BLAST neighbor: P38606
Species:

Structure of domain e3gqbA4

Domains in the same chain:

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e3gqbA1 A:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3gqbA4 A:70-111,A:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gqbA3 A:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3gqbA5 A:438-578 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e3gqbA1 A:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3gqbA4 A:70-111,A:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gqbA3 A:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3gqbA5 A:438-578 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3gqbB1 B:5-80 cradle loop barrel RIFT-related Alanine racemase-C
e3gqbB4 B:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gqbB5 B:366-464 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3gqbC1 C:1-70 cradle loop barrel RIFT-related Alanine racemase-C
e3gqbC4 C:70-111,C:184-436 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gqbC3 C:109-183 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3gqbC5 C:438-578 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3gqbD1 D:5-80 cradle loop barrel RIFT-related Alanine racemase-C
e3gqbD4 D:81-365 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3gqbD5 D:366-464 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase

Structural contacts of domain e3gqbA4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gqbB4 A:X,Y,Z->B:x,y,z P-loop domains-related Interaction Interface Pymol
e3gqbB5 A:X,Y,Z->B:x,y,z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e3gqbB4 A:x,y,z->B:-Y+1,X-Y+1,Z P-loop domains-related Interaction Interface Pymol
e3gqbC3 A:X,Y,Z->C:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol