Domain ID e3gqcB2

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  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: Lesion bypass DNA polymerase (Y-family), little finger domain
  • T: Lesion bypass DNA polymerase (Y-family), little finger domain
  • F: IMS_C
UID: 000363451
Type: Automatic domain
Parent: e1jx4A2
Range: B:702-828
PDB: 3gqc
PDB Description: DNA REPAIR PROTEIN REV1
UniProt: Q9UBZ9
Hsap BLAST neighbor: Q9UBZ9
Species: Homo sapiens

Structure of domain e3gqcB2

Domains in the same chain:

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e3gqcB3 B:344-391,B:416-636 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3gqcB1 B:637-701 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3gqcB2 B:702-828 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3gqcA1 A:344-391,A:416-641 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3gqcA2 A:642-706 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3gqcA3 A:707-828 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e3gqcB3 B:344-391,B:416-636 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3gqcB1 B:637-701 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3gqcB2 B:702-828 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e3gqcC4 C:344-385,C:416-472,C:500-641 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3gqcC3 C:642-706 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3gqcC2 C:707-827 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e3gqcD3 D:346-389,D:416-636 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3gqcD1 D:637-701 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3gqcD2 D:702-827 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3gqcB2 of H-group "Lesion bypass DNA polymerase (Y-family), little finger domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gqcC2 B:X,Y,Z-1->C:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol