Domain ID e3gzuA1

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  • A: a+b complex topology
  • X: Inner layer core protein p3-related
  • H: Inner layer core protein p3-related
  • T: Inner layer core protein p3-related
  • F: Rota_VP2
UID: 000367522
Type: Automatic domain
Parent: e3kz4A1
Range: A:100-880
PDB: 3gzu
PDB Description: Inner capsid protein VP2
UniProt: B2BMD1
Species: Rotavirus A

Structure of domain e3gzuA1

Domains in the same chain:

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e3gzuA1 A:100-880 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related

Domains in the same PDB:

e3gzuA1 A:100-880 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e3gzuB1 B:81-880 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e3gzuC2 C:1-148,C:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuC1 C:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuD2 D:1-148,D:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuD1 D:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuE2 E:1-148,E:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuE1 E:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuF2 F:1-148,F:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuF1 F:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuG2 G:1-148,G:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuG1 G:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuH2 H:1-148,H:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuH1 H:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuI2 I:1-148,I:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuI1 I:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuJ2 J:1-148,J:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuJ1 J:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuK2 K:1-148,K:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuK1 K:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuL2 L:1-148,L:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuL1 L:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuM2 M:1-148,M:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuM1 M:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuN2 N:1-148,N:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuN1 N:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuO2 O:1-148,O:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuO1 O:149-332 jelly-roll Viral protein domain Viral protein domain

Structural contacts of domain e3gzuA1 of H-group "Inner layer core protein p3-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gzuB1 A:X,Y,Z->B:x,y,z Inner layer core protein p3-related Interaction Interface Pymol
e3gzuG2 A:X,Y,Z->G:x,y,z A virus capsid protein alpha-helical domain Interaction Interface Pymol
e3gzuF2 A:X,Y,Z->F:x,y,z A virus capsid protein alpha-helical domain Interaction Interface Pymol
e3gzuK2 A:X,Y,Z->K:x,y,z A virus capsid protein alpha-helical domain Interaction Interface Pymol