Domain ID e3gzuD2

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  • A: alpha bundles
  • X: A virus capsid protein alpha-helical domain
  • H: A virus capsid protein alpha-helical domain
  • T: A virus capsid protein alpha-helical domain
  • F: Rota_Capsid_VP6
UID: 000367527
Type: Automatic domain
Parent: e1qhdA2
Range: D:1-148,D:333-397
PDB: 3gzu
PDB Description: Intermediate capsid protein VP6
UniProt: P04509
Species:

Structure of domain e3gzuD2

Domains in the same chain:

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e3gzuD2 D:1-148,D:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuD1 D:149-332 jelly-roll Viral protein domain Viral protein domain

Domains in the same PDB:

e3gzuA1 A:100-880 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e3gzuB1 B:81-880 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e3gzuC2 C:1-148,C:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuC1 C:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuD2 D:1-148,D:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuD1 D:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuE2 E:1-148,E:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuE1 E:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuF2 F:1-148,F:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuF1 F:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuG2 G:1-148,G:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuG1 G:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuH2 H:1-148,H:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuH1 H:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuI2 I:1-148,I:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuI1 I:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuJ2 J:1-148,J:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuJ1 J:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuK2 K:1-148,K:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuK1 K:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuL2 L:1-148,L:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuL1 L:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuM2 M:1-148,M:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuM1 M:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuN2 N:1-148,N:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuN1 N:149-332 jelly-roll Viral protein domain Viral protein domain
e3gzuO2 O:1-148,O:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e3gzuO1 O:149-332 jelly-roll Viral protein domain Viral protein domain

Structural contacts of domain e3gzuD2 of H-group "A virus capsid protein alpha-helical domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3gzuC1 D:x,y,z->C:X,Y,Z Viral protein domain Interaction Interface Pymol
e3gzuC2 D:x,y,z->C:X,Y,Z A virus capsid protein alpha-helical domain Interaction Interface Pymol
e3gzuE2 D:X,Y,Z->E:x,y,z A virus capsid protein alpha-helical domain Interaction Interface Pymol
e3gzuB1 D:x,y,z->B:X,Y,Z Inner layer core protein p3-related Interaction Interface Pymol
e3gzuL2 D:X,Y,Z->L:x,y,z A virus capsid protein alpha-helical domain Interaction Interface Pymol