Domain ID e3i8fF1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 000388874
Type: Automatic domain
Parent: e1dmgA1
Range: F:1-208
PDB: 3i8f
PDB Description:
Hsap BLAST neighbor: Q9BYD3
Species:

Structure of domain e3i8fF1

Domains in the same chain:

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e3i8fF1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e3i8f01 0:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3i8f11 1:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3i8f21 2:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3i8f31 3:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3i8f41 4:1-50 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3i8f51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3i8f61 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3i8f71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3i8f81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3i8fD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3i8fD2 D:127-273 SH3 SH3 SH3
e3i8fF1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3i8fG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3i8fH4 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i8fH3 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i8fK2 K:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3i8fK1 K:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e3i8fM1 M:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3i8fN1 N:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3i8fS1 S:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3i8fT1 T:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3i8fU1 U:2-103 SH3 SH3 SH3
e3i8fV1 V:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3i8fV2 V:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e3i8fW1 W:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3i8fX1 X:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3i8fZ1 Z:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Structural contacts of domain e3i8fF1 of H-group "Ribosomal protein L4":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dmgA1 F:X,Y,Z->O:x,y,z Ribosomal protein L4 Interaction Interface Pymol