Domain ID e3i8iL4

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: Ribosomal protein L11, C-terminal domain
  • F: Ribosomal_L11
UID: 001197535
Type: Automatic domain
Parent: e1vqoI1
Range: L:72-147
PDB: 3i8i
PDB Description:
Hsap BLAST neighbor: Q9Y3B7
Species:

Structure of domain e3i8iL4

Domains in the same chain:

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e3i8iL3 L:3-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3i8iL4 L:72-147 HTH HTH Ribosomal protein L11, C-terminal domain

Domains in the same PDB:

e3i8i01 0:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3i8i11 1:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3i8i21 2:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3i8i31 3:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3i8i41 4:1-50 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3i8i51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3i8i61 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3i8i71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3i8i81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3i8iD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3i8iD2 D:127-273 SH3 SH3 SH3
e3i8iF1 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3i8iG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3i8iH4 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i8iH3 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3i8iI1 I:1-30 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e3i8iJ1 J:1-30 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e3i8iK2 K:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3i8iK1 K:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e3i8iL3 L:3-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3i8iL4 L:72-147 HTH HTH Ribosomal protein L11, C-terminal domain
e3i8iM1 M:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3i8iN1 N:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3i8iS1 S:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3i8iT1 T:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3i8iU1 U:2-103 SH3 SH3 SH3
e3i8iV1 V:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3i8iV2 V:93-200 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e3i8iW1 W:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3i8iX1 X:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3i8iY1 Y:1-145 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e3i8iZ1 Z:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Structural contacts of domain e3i8iL4 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3i8iY1 L:x,y,z->Y:X,Y,Z Ribosomal protein L10-like Interaction Interface Pymol