Domain ID e3iafD1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 000385362
Type: Automatic domain
Parent: e2ez9A1
Range: D:186-367
PDB: 3iaf
PDB Description: Benzaldehyde lyase
UniProt: Q9F4L3
Species: Pseudomonas fluorescens

Structure of domain e3iafD1

Domains in the same chain:

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e3iafD2 D:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafD1 D:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafD3 D:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e3iafA2 A:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafA1 A:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafA3 A:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafB2 B:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafB1 B:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafB3 B:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafC2 C:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafC1 C:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafC3 C:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafD2 D:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafD1 D:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafD3 D:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e3iafD1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3iafC2 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3iafA2 D:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3iafA1 D:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e3iafD3 D:x,y,z->D:-X,-X+Y,-Z-2/3 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3iafD1 D:x,y,z->D:-X,-X+Y,-Z-2/3 Rossmann-related Interaction Interface Pymol
e3iafD1 D:-X,-X+Y,-Z-2/3->D:x,y,z Rossmann-related Interaction Interface Pymol
e3iafD3 D:-X,-X+Y,-Z-2/3->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3iafC3 D:X-Y-1,-Y-1,-Z-1/3->C:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol