Domain ID e3iafD2

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_N
UID: 000385363
Type: Automatic domain
Parent: e1pvdA2
Range: D:2-185
Ligands: TPP
PDB: 3iaf
PDB Description: Benzaldehyde lyase
UniProt: Q9F4L3
Hsap BLAST neighbor: A1L0T0
Species: Pseudomonas fluorescens

Structure of domain e3iafD2

Domains in the same chain:

e3iafD2 D:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafD1 D:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafD3 D:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e3iafA2 A:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafA1 A:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafA3 A:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafB2 B:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafB1 B:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafB3 B:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafC2 C:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafC1 C:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafC3 C:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafD2 D:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3iafD1 D:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e3iafD3 D:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e3iafD2 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3iafC2 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3iafC3 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3iafC1 D:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol
e3iafA1 D:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e3iafB2 D:x,y,z->B:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol