ECOD: domain e3iamB2

Domain ID e3iamB2

A: alpha bundles
X: NQO2 helical bundle domain
H: NQO2 helical bundle domain
T: NQO2 helical bundle domain
F: 2Fe-2S_thioredx

UID:	001031473
Type:	Automatic domain
Parent:	e2fug22
Range:	B:2-74
PDB:	3iam
PDB Description:	NADH-QUINONE OXIDOREDUCTASE SUBUNIT 2
UniProt:	Q56221
Species:

Domains in the same chain:

Download Pymol

e3iamB2	B:2-74	NQO2 helical bundle domain	NQO2 helical bundle domain	NQO2 helical bundle domain
e3iamB1	B:75-180	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like

Domains in the same PDB:

e3iam13	1:2-249	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like
e3iam12	1:250-333	beta-Grasp	Ubiquitin-related	Nqo1 middle domain-like
e3iam11	1:334-438	Bromodomain-like	Nqo1C-terminal domain-like	Nqo1C-terminal domain-like
e3iam22	2:2-74	NQO2 helical bundle domain	NQO2 helical bundle domain	NQO2 helical bundle domain
e3iam21	2:75-180	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e3iam34	3:1-95	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3iam39	3:96-161	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin
e3iam37	3:162-246	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e3iam310	3:247-304	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e3iam36	3:305-379,3:542-685	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e3iam35	3:375-541	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e3iam38	3:686-777	cradle loop barrel	RIFT-related	double psi
e3iam46	4:25-64,4:379-409	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3iam45	4:65-111,4:313-378	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3iam44	4:108-312	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit
e3iam51	5:1-196	Nqo5-like	Nqo5-like	Nqo5-like
e3iam61	6:15-175	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e3iam71	7:3-129	Type III secretory system chaperone-like	Frataxin-like	Frataxin-like
e3iam91	9:26-179	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e3iamA3	A:2-249	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like
e3iamA2	A:250-333	beta-Grasp	Ubiquitin-related	Nqo1 middle domain-like
e3iamA1	A:334-438	Bromodomain-like	Nqo1C-terminal domain-like	Nqo1C-terminal domain-like
e3iamB2	B:2-74	NQO2 helical bundle domain	NQO2 helical bundle domain	NQO2 helical bundle domain
e3iamB1	B:75-180	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e3iamC4	C:1-95	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3iamC9	C:96-161	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin
e3iamC7	C:162-246	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e3iamC10	C:247-304	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e3iamC6	C:305-379,C:542-685	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e3iamC5	C:375-541	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e3iamC8	C:686-777	cradle loop barrel	RIFT-related	double psi
e3iamD6	D:25-64,D:379-409	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3iamD5	D:65-111,D:313-378	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3iamD4	D:108-312	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit
e3iamE1	E:1-196	Nqo5-like	Nqo5-like	Nqo5-like
e3iamF1	F:15-175	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e3iamG1	G:26-179	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e3iamH1	H:3-129	Type III secretory system chaperone-like	Frataxin-like	Frataxin-like

Structural contacts of domain e3iamB2 of H-group "NQO2 helical bundle domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3iamA1	B:x,y,z->A:X,Y,Z	Nqo1C-terminal domain-like	Interaction Interface Pymol
e3iamA3	B:x,y,z->A:X,Y,Z	Nqo1 FMN-binding domain-like	Interaction Interface Pymol
e3iamH1	B:X,Y,Z->H:x,y,z	Frataxin-like	Interaction Interface Pymol
e3iamC5	B:X,Y,Z->C:x,y,z	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Interaction Interface Pymol
e3iamC7	B:X,Y,Z->C:x,y,z	4Fe-4S ferredoxin	Interaction Interface Pymol
e3iam13	B:x,y,z->1:-X,Y-1/2,-Z+1	Nqo1 FMN-binding domain-like	Interaction Interface Pymol