Domain ID e3izwP1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 000415541
Type: Automatic domain
Parent: e2uubL1
Range: P:1-123
PDB: 3izw
PDB Description:
Hsap BLAST neighbor: O15235
Species:

Structure of domain e3izwP1

Domains in the same chain:

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e3izwP1 P:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e3izwC3 C:1-202 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3izwC1 C:203-297 cradle loop barrel RIFT-related Alanine racemase-C
e3izwC2 C:298-393 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e3izwG1 G:0-104 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3izwG2 G:105-205 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3izwI3 I:1-75 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3izwI4 I:76-166 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3izwJ1 J:1-135 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3izwK1 K:0-150 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3izwL1 L:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3izwL2 L:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3izwN1 N:1-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3izwO1 O:1-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3izwP1 P:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3izwR1 R:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3izwS1 S:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3izwT1 T:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3izwV1 V:1-74 HTH HTH tri-helical
e3izwX1 X:1-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3izwY1 Y:0-69 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21

Structural contacts of domain e3izwP1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3izwC1 P:X,Y,Z->C:x,y,z RIFT-related Interaction Interface Pymol