Domain ID e3izxB2

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  • A: a/b three-layered sandwiches
  • X: Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein
  • H: Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein
  • T: Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein
  • F: VP1_protrusion
UID: 001386919
Type: Automatic domain
Parent: e3izxC2
Range: B:828-959
PDB: 3izx
PDB Description: Capsid protein VP1
UniProt: Q6TS43
Species:

Structure of domain e3izxB2

Domains in the same chain:

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e3izxB1 B:135-827,B:960-1333 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e3izxB2 B:828-959 Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein

Domains in the same PDB:

e3izxA3 A:1-363 Reovirus guanylyltransferase (GTase) Reovirus guanylyltransferase (GTase) Reovirus guanylyltransferase (GTase)
e3izxA4 A:364-400,A:722-821 Reovirus turret protein bridge domain Reovirus turret protein bridge domain Reovirus turret protein bridge domain
e3izxA1 A:401-721 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3izxA2 A:822-1057 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3izxB1 B:135-827,B:960-1333 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e3izxB2 B:828-959 Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein
e3izxC1 C:74-827,C:960-1333 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e3izxC2 C:828-959 Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein
e3izxD1 D:3-292 Viral structural protein 5 Viral structural protein 5 Viral structural protein 5
e3izxE1 E:3-292 Viral structural protein 5 Viral structural protein 5 Viral structural protein 5

Structural contacts of domain e3izxB2 of H-group "Small protrusion domain in cytoplasmic polyhedrosis virus capsid shell protein":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3izxC1 B:x,y,z->C:X,Y,Z Inner layer core protein p3-related Interaction Interface Pymol
e3izxD1 B:x,y,z->D:X,Y,Z Viral structural protein 5 Interaction Interface Pymol