Domain ID e3j00N1

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: Ribosomal_S14
UID: 000417346
Type: Automatic domain
Parent: e2qalN1
Range: N:1-100
PDB: 3j00
PDB Description:
Hsap BLAST neighbor: O60783
Species:

Structure of domain e3j00N1

Domains in the same chain:

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e3j00N1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e3j0001 0:44-243 Four-helical up-and-down bundle Apolipoprotein Apolipoprotein
e3j0011 1:44-243 Four-helical up-and-down bundle Apolipoprotein Apolipoprotein
e3j00C1 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j00C2 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j00E3 E:1-75 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j00E4 E:76-166 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j00F1 F:1-135 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3j00G1 G:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j00H1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j00H2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j00J1 J:1-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j00K1 K:1-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j00L1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j00N1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j00O1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j00P1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3j00R1 R:1-74 HTH HTH tri-helical
e3j00T1 T:1-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3j00U1 U:1-70 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e3j00Z1 Z:22-119 Polypeptide transport-associated (POTRA) domain Polypeptide transport-associated (POTRA) domain Polypeptide transport-associated (POTRA) domain

Structural contacts of domain e3j00N1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j00C2 N:X,Y,Z->C:x,y,z Ribosomal protein S3-C Interaction Interface Pymol
e3j00C1 N:X,Y,Z->C:x,y,z KH-domains Interaction Interface Pymol
e3j00J1 N:X,Y,Z->J:x,y,z Ribosomal protein S10 Interaction Interface Pymol