Domain ID e3j13M1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 000973947
Type: Automatic domain
Parent: e2uubK1
Range: M:1-116
PDB: 3j13
PDB Description:
Hsap BLAST neighbor: P62263
Species:

Structure of domain e3j13M1

Domains in the same chain:

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e3j13M1 M:1-116 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3j13E2 E:1-104 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j13E1 E:105-205 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j13G3 G:1-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j13G4 G:78-166 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j13H1 H:1-135 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3j13I1 I:1-150 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j13J1 J:1-63 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j13J2 J:64-128 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j13L1 L:1-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j13M1 M:1-116 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j13N1 N:1-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j13P1 P:1-95 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j13Q2 Q:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j13R1 R:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3j13T1 T:1-54 HTH HTH tri-helical
e3j13V1 V:1-84 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3j13M1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j13I1 M:X,Y,Z->I:x,y,z Ribosomal protein S7 Interaction Interface Pymol