Domain ID e3j21O1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_L5e
UID: 000154061
Type: Automatic domain
Parent: e1vqoN1
Range: O:1-197
PDB: 3j21
PDB Description:
Hsap BLAST neighbor: P46777
Species:

Structure of domain e3j21O1

Domains in the same chain:

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e3j21O1 O:1-197 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3j2141 4:1-123 Bacillus chorismate mutase-like L30e-like L30e-like
e3j2151 5:3-83 SH3 SH3 SH3
e3j2161 6:1-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j21a1 a:4-93 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e3j21A1 A:1-53,A:151-216 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3j21A2 A:54-150 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e3j21b1 b:3-129 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e3j21B2 B:1-92 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j21B1 B:93-239 SH3 SH3 SH3
e3j21c1 c:1-87 cradle loop barrel RIFT-related Alanine racemase-C
e3j21C1 C:1-365 cradle loop barrel RIFT-related Alanine racemase-C
e3j21D1 D:1-255 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3j21e1 e:1-62 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j21E2 E:1-116,E:137-186 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3j21f1 f:1-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e3j21F4 F:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j21F3 F:86-184 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j21g1 g:3-47 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j21G1 G:1-123 Bacillus chorismate mutase-like L30e-like L30e-like
e3j21H2 H:1-69 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3j21H1 H:70-134 HTH HTH Ribosomal protein L11, C-terminal domain
e3j21i1 i:6-83 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j21I1 I:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3j21j1 j:1-94 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j21J1 J:10-141 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j21k3 k:6-109,k:186-217 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e3j21k4 k:110-185 Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P)
e3j21K2 K:3-83 SH3 SH3 SH3
e3j21l1 l:1-77 GP2-like RplX-like RplX-like
e3j21L1 L:1-147 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j21M1 M:1-194 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j21O1 O:1-197 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j21P1 P:1-120 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j21Q1 Q:1-54 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e3j21Q2 Q:55-150 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e3j21R1 R:3-97 SH3 SH3 SH3
e3j21S1 S:6-155 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3j21T1 T:3-86 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j21U1 U:1-121 SH3 SH3 SH3
e3j21V1 V:1-66 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j21W1 W:1-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3j21Y1 Y:1-155 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3j21Z1 Z:1-99 Bacillus chorismate mutase-like L30e-like L30e-like

Structural contacts of domain e3j21O1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j21R1 O:x,y,z->R:X,Y,Z SH3 Interaction Interface Pymol
e3j21E2 O:x,y,z->E:X,Y,Z Ribosomal protein L5 Interaction Interface Pymol