Domain ID e3j3613

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: EF-G C-terminal domain-like
  • T: EF-G C-terminal domain-like
  • F: EFG_III
UID: 001633041
Type: Automatic domain
Parent: e3zztA5
Range: 1:338-419
PDB: 3j36
PDB Description:
Species:

Structure of domain e3j3613

Domains in the same chain:

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e3j3614 1:1-240 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3j3612 1:241-337 cradle loop barrel RIFT-related Alanine racemase-C
e3j3613 1:338-419 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e3j3615 1:420-533,1:603-639 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j3611 1:534-602 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e3j3614 1:1-240 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3j3612 1:241-337 cradle loop barrel RIFT-related Alanine racemase-C
e3j3613 1:338-419 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e3j3615 1:420-533,1:603-639 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j3611 1:534-602 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e3j36C2 C:1-104 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j36C1 C:105-205 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j36E2 E:1-69 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j36E1 E:70-166 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j36F1 F:1-135 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3j36G1 G:1-150 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j36H5 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j36H6 H:67-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j36J1 J:1-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j36K1 K:1-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j36L1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j36N1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j36O1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j36P1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3j36R1 R:1-74 HTH HTH tri-helical
e3j36T1 T:1-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3j3613 of H-group "EF-G C-terminal domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j36L1 1:X,Y,Z->L:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol