Domain ID e3j43W1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_S27e
UID: 001109655
Type: Automatic domain
Parent: e1qxfA1
Range: W:1-63
PDB: 3j43
PDB Description:
Species:

Structure of domain e3j43W1

Domains in the same chain:

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e3j43W1 W:1-63 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e3j4331 3:1-123 Bacillus chorismate mutase-like L30e-like L30e-like
e3j43A1 A:9-95 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e3j43A2 A:96-198 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e3j43C2 C:1-85 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j43C1 C:86-186 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j43E3 E:3-117 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e3j43E2 E:118-179 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j43E1 E:180-243 SH3 SH3 SH3
e3j43G1 G:1-125 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3j43H2 H:1-75,H:96-215 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j43I1 I:2-63 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j43I2 I:64-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j43J1 J:1-127 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j43L1 L:1-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j43M1 M:5-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j43N1 N:3-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j43P1 P:1-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j43Q2 Q:1-89 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e3j43Q1 Q:90-158 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j43S1 S:1-67 HTH HTH FF domain
e3j43U1 U:1-144 HTH HTH winged
e3j43V1 V:1-99 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j43W1 W:1-63 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j43X1 X:1-71 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j43Y1 Y:1-50 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e3j43W1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j43Q2 W:X,Y,Z->Q:x,y,z 40S ribosomal protein S13 N-terminal domain Interaction Interface Pymol
e3j43I1 W:X,Y,Z->I:x,y,z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol