Domain ID e3j44E1

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  • A: a+b two layers
  • X: Ribosomal protein L5
  • H: Ribosomal protein L5
  • T: Ribosomal protein L5
  • F: Ribosomal_L5,Ribosomal_L5_C
UID: 001109669
Type: Automatic domain
Parent: e1iq4A1
Range: E:1-186
PDB: 3j44
PDB Description:
Hsap BLAST neighbor: P62913
Species:

Structure of domain e3j44E1

Domains in the same chain:

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e3j44E1 E:1-186 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5

Domains in the same PDB:

e3j4451 5:3-83 SH3 SH3 SH3
e3j44a1 a:4-93 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e3j44A1 A:1-53,A:151-216 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3j44A2 A:54-150 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e3j44b1 b:3-129 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e3j44B1 B:1-92 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j44B2 B:93-239 SH3 SH3 SH3
e3j44C1 C:1-365 cradle loop barrel RIFT-related Alanine racemase-C
e3j44D1 D:1-255 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3j44e1 e:1-62 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j44E1 E:1-186 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3j44F4 F:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j44F3 F:86-184 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j44g1 g:3-47 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j44G1 G:1-123 Bacillus chorismate mutase-like L30e-like L30e-like
e3j44H1 H:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3j44H2 H:72-134 HTH HTH Ribosomal protein L11, C-terminal domain
e3j44i1 i:6-83 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j44I1 I:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3j44j1 j:1-94 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j44J1 J:10-141 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j44k3 k:6-109,k:186-217 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e3j44k2 k:110-185 Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P)
e3j44K1 K:3-83 SH3 SH3 SH3
e3j44L1 L:1-147 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j44M1 M:1-194 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j44O1 O:1-197 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j44P1 P:1-120 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j44R1 R:3-97 SH3 SH3 SH3
e3j44V1 V:1-66 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j44Y1 Y:1-155 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3j44Z1 Z:1-99 Bacillus chorismate mutase-like L30e-like L30e-like

Structural contacts of domain e3j44E1 of H-group "Ribosomal protein L5":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j44O1 E:x,y,z->O:X,Y,Z Ribonuclease H-like Interaction Interface Pymol