Domain ID e3j53H2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 001109989
Type: Automatic domain
Parent: e1seiA2
Range: H:66-129
PDB: 3j53
PDB Description:
Species:

Structure of domain e3j53H2

Domains in the same chain:

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e3j53H1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j53H2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e3j53C2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j53C1 C:106-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j53E2 E:8-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j53E1 E:77-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j53F1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3j53G1 G:1-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j53H1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j53H2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j53J1 J:4-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j53K1 K:11-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j53L1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j53N1 N:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j53O1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j53P1 P:1-81 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3j53R1 R:18-74 HTH HTH tri-helical
e3j53T1 T:1-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3j53U1 U:2-54 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21

Structural contacts of domain e3j53H2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j53E1 H:X,Y,Z->E:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol