Domain ID e3j5dE1

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 001110274
Type: Automatic domain
Parent: e1pkpA2
Range: E:77-159
PDB: 3j5d
PDB Description:
Species:

Structure of domain e3j5dE1

Domains in the same chain:

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e3j5dE2 E:8-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j5dE1 E:77-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e3j5dC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j5dC1 C:106-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j5dE2 E:8-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j5dE1 E:77-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j5dF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3j5dG1 G:1-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j5dH1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j5dH2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j5dJ1 J:4-103 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j5dK1 K:11-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j5dL1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j5dN1 N:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j5dO1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j5dP1 P:1-81 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3j5dR1 R:18-74 HTH HTH tri-helical
e3j5dT1 T:1-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3j5dU1 U:2-54 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21

Structural contacts of domain e3j5dE1 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j5dH1 E:x,y,z->H:X,Y,Z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol
e3j5dH2 E:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol