Domain ID e3j5wQ1

Download files:
  • A: a+b two layers
  • X: Enolase-N/ribosomal protein
  • H: Prokaryotic ribosomal protein L17
  • T: Prokaryotic ribosomal protein L17
  • F: Ribosomal_L17
UID: 001125021
Type: Automatic domain
Parent: e1gd8A1
Range: Q:1-120
PDB: 3j5w
PDB Description:
Hsap BLAST neighbor: Q9NRX2
Species:

Structure of domain e3j5wQ1

Domains in the same chain:

Download Pymol

e3j5wQ1 Q:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17

Domains in the same PDB:

e3j5w11 1:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3j5w21 2:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3j5w31 3:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3j5w41 4:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j5w61 6:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3j5w71 7:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3j5w81 8:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3j5wC4 C:3-68,C:160-227 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3j5wC3 C:69-159 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e3j5wD1 D:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j5wD2 D:125-271 SH3 SH3 SH3
e3j5wF1 F:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3j5wG1 G:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3j5wH2 H:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j5wH1 H:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j5wI1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3j5wJ1 J:1-131 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e3j5wK2 K:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3j5wK1 K:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3j5wL1 L:54-121 ClpS-like ClpS-related ClpS-related
e3j5wM1 M:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3j5wN1 N:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j5wQ1 Q:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3j5wR1 R:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j5wU1 U:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3j5wV1 V:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3j5wW1 W:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j5wX1 X:1-102 SH3 SH3 SH3
e3j5wY1 Y:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3j5wZ1 Z:6-81 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Structural contacts of domain e3j5wQ1 of H-group "Prokaryotic ribosomal protein L17":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j5w41 Q:x,y,z->4:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e3j5w41 Q:X,Y,Z->E:x,y,z Rubredoxin-related Interaction Interface Pymol
e3j5wV1 Q:x,y,z->V:X,Y,Z Ribosomal protein L22 Interaction Interface Pymol