Domain ID e3j60O1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 001144202
Type: Automatic domain
Parent: e2uubK1
Range: O:32-150
PDB: 3j60
PDB Description:
Hsap BLAST neighbor: P62263
Species:

Structure of domain e3j60O1

Domains in the same chain:

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e3j60O1 O:32-150 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3j60a1 a:2-94 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j60b1 b:1-86 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j60B1 B:23-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e3j60B2 B:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e3j60c1 c:1-58 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j60d1 d:9-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j60D3 D:12-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j60D1 D:92-219 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j60E1 E:43-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e3j60E2 E:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j60E3 E:176-242 SH3 SH3 SH3
e3j60f1 f:7-77 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j60F1 F:10-200 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j60g1 g:1-380 beta-propeller-like beta-propeller 7-bladed
e3j60G1 G:1-232 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3j60H2 H:4-110 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e3j60H1 H:111-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e3j60I1 I:149-214 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j60K1 K:1-96 HTH HTH winged
e3j60M1 M:9-131 Bacillus chorismate mutase-like L30e-like L30e-like
e3j60N2 N:31-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e3j60N1 N:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j60O1 O:32-150 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j60T1 T:1-146 HTH HTH winged
e3j60U1 U:1-128 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j60W1 W:1-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j60W2 W:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j60X1 X:1-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j60Y2 Y:1-138 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j60Z1 Z:9-108 HTH HTH winged

Structural contacts of domain e3j60O1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j60B1 O:x,y,z->B:X,Y,Z 40S ribosomal protein S3A N-terminal domain Interaction Interface Pymol
e3j60a1 O:x,y,z->a:X,Y,Z LIM domain-like Interaction Interface Pymol
e3j60c1 O:X,Y,Z->c:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e3j60F1 O:X,Y,Z->F:x,y,z Ribosomal protein S7 Interaction Interface Pymol