Domain ID e3j77921

Download files:
  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L44
UID: 001420851
Type: Automatic domain
Parent: e1vqo31
Range: 92:2-106
PDB: 3j77
PDB Description: 60S ribosomal protein L42
UniProt: P0CX27
Hsap BLAST neighbor: P83881
Species: Saccharomyces cerevisiae

Structure of domain e3j77921

Domains in the same chain:

Download Pymol

e3j77921 92:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e3j77101 10:1-96 HTH HTH winged
e3j77111 11:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j77121 12:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e3j77132 13:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e3j77131 13:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j77141 14:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j77151 15:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e3j77161 16:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j77171 17:2-126 HTH HTH FF domain
e3j77181 18:2-146 HhH/H2TH H2TH H2TH
e3j77191 19:2-144 HTH HTH winged
e3j77201 20:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j77211 21:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e3j77222 22:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j77221 22:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j77231 23:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j77241 24:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j77251 25:36-105 HTH HTH winged
e3j77261 26:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j77271 27:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j77281 28:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j77291 29:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j77301 30:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e3j77311 31:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j77601 60:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e3j77611 61:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3j77621 62:74-163 HTH HTH Ribosomal protein L11, C-terminal domain
e3j77622 62:9-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3j77631 63:7-190 RPL13 RPL13 RPL13
e3j77641 64:3-138 SH3 SH3 SH3
e3j77651 65:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j77661 66:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3j77671 67:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3j77681 68:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j77691 69:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e3j77692 69:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e3j77702 70:1-69 GP2-like RplX-like RplX-like
e3j77701 70:70-172 GP2-like RplX-like RplX-like
e3j77711 71:2-160 SH3 SH3 SH3
e3j77721 72:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e3j77731 73:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j77741 74:1-135 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j77751 75:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j77761 76:2-127 SH3 SH3 SH3
e3j77771 77:2-136 SH3 SH3 SH3
e3j77781 78:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j77791 79:2-47 RPL29 RPL29 RPL29
e3j77801 80:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e3j77811 81:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e3j77821 82:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e3j77831 83:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e3j77841 84:2-103 Glucocorticoid receptor-like RPL34 RPL34
e3j77851 85:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3j77861 86:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e3j77871 87:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j77881 88:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e3j77891 89:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e3j77901 90:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j77911 91:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e3j77921 92:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j77931 93:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j77L11 L1:57-152 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e3j77L12 L1:13-56,L1:153-216 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3j77L21 L2:99-253 SH3 SH3 SH3
e3j77L22 L2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j77L31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e3j77L42 L4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3j77L43 L4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e3j77L51 L5:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j77L61 L6:2-109,L6:129-176 SH3 SH3 SH3
e3j77L71 L7:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3j77L81 L8:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e3j77L91 L9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j77L92 L9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j77P01 P0:3-107,P0:184-199 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e3j77RC1 RC:2-319 beta-propeller-like beta-propeller 7-bladed
e3j77S01 S0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e3j77S11 S1:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e3j77S12 S1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e3j77S23 S2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e3j77S21 S2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j77S22 S2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j77S32 S3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j77S31 S3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j77S43 S4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e3j77S41 S4:176-261 SH3 SH3 SH3
e3j77S42 S4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j77S51 S5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j77S61 S6:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3j77S71 S7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e3j77S72 S7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e3j77S81 S8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j77S91 S9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif