Domain ID e3j7pm1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L40e
UID: 001421120
Type: Automatic domain
Parent: e2ayjA1
Range: m:77-128
Ligands: ZN
PDB: 3j7p
PDB Description: Ribosomal protein eL40
UniProt: P63053
Hsap BLAST neighbor: P62987
Species: Sus scrofa

Structure of domain e3j7pm1

Domains in the same chain:

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e3j7pm1 m:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e3j7p44 4:3-359 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3j7p42 4:360-497 cradle loop barrel RIFT-related Alanine racemase-C
e3j7p41 4:498-576 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e3j7p43 4:577-741 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j7p45 4:742-858 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e3j7pa1 a:2-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j7pA1 A:2-96 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j7pA2 A:97-245 SH3 SH3 SH3
e3j7pb1 b:2-50 RPL29 RPL29 RPL29
e3j7pB1 B:2-395 cradle loop barrel RIFT-related Alanine racemase-C
e3j7pc1 c:13-106 Bacillus chorismate mutase-like L30e-like L30e-like
e3j7pC2 C:2-297 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3j7pC1 C:298-368 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e3j7pd1 d:18-124 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e3j7pD1 D:3-294 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j7pe1 e:2-129 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e3j7pE1 E:38-284 SH3 SH3 SH3
e3j7pf1 f:2-110 cradle loop barrel RIFT-related Alanine racemase-C
e3j7pF1 F:26-250 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3j7pg1 g:3-103 Glucocorticoid receptor-like RPL34 RPL34
e3j7pG1 G:26-266 Bacillus chorismate mutase-like L30e-like L30e-like
e3j7ph1 h:2-123 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3j7pH1 H:1-87 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j7pH2 H:88-190 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j7pi1 i:2-103 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e3j7pI1 I:2-214 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e3j7pj1 j:2-87 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j7pJ1 J:9-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3j7pk1 k:2-61 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e3j7pK2 K:13-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3j7pK1 K:74-163 HTH HTH Ribosomal protein L11, C-terminal domain
e3j7pl1 l:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e3j7pL1 L:6-193 RPL13 RPL13 RPL13
e3j7pm1 m:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j7pM1 M:2-139 SH3 SH3 SH3
e3j7pn1 n:2-24 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e3j7pN1 N:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j7po1 o:2-105 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j7pO1 O:3-203 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3j7pp1 p:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j7pP1 P:2-154 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3j7pq3 q:5-109,q:183-206 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e3j7pq2 q:110-182 Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P)
e3j7pQ1 Q:2-188 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j7pr1 r:2-126 RPL28 RPL28 RPL28
e3j7pR1 R:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e3j7pR2 R:57-181 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e3j7pS2 S:2-72 GP2-like RplX-like RplX-like
e3j7pS1 S:73-176 GP2-like RplX-like RplX-like
e3j7pSa1 Sa:2-99 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j7pSA1 SA:2-209 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e3j7pSb1 Sb:2-84 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j7pSB2 SB:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e3j7pSB1 SB:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e3j7pSc1 Sc:5-68 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j7pSC2 SC:202-276 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j7pSC4 SC:135-201 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3j7pSC3 SC:59-134 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e3j7pSd1 Sd:5-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j7pSD1 SD:92-227 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3j7pSD2 SD:1-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3j7pSe1 Se:3-59 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e3j7pSE3 SE:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j7pSE2 SE:176-263 SH3 SH3 SH3
e3j7pSE1 SE:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e3j7pSf1 Sf:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j7pSF1 SF:14-204 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3j7pSg1 Sg:2-314 beta-propeller-like beta-propeller 7-bladed
e3j7pSG1 SG:1-237 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3j7pSH2 SH:5-107 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e3j7pSH1 SH:108-193 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e3j7pSI1 SI:2-207 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j7pSJ1 SJ:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e3j7pSK1 SK:1-98 HTH HTH winged
e3j7pSL1 SL:2-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j7pSM1 SM:9-132 Bacillus chorismate mutase-like L30e-like L30e-like
e3j7pSN1 SN:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3j7pSN2 SN:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e3j7pSO1 SO:16-151 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j7pSP1 SP:4-99 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e3j7pSQ1 SQ:6-146 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3j7pSR1 SR:1-129 HTH HTH FF domain
e3j7pSS1 SS:6-142 HhH/H2TH H2TH H2TH
e3j7pST1 ST:4-144 HTH HTH winged
e3j7pSU1 SU:16-119 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3j7pSV1 SV:1-82 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e3j7pSW2 SW:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3j7pSW1 SW:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3j7pSX1 SX:2-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j7pSY1 SY:3-128 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j7pSZ1 SZ:41-115 HTH HTH winged
e3j7pT1 T:2-160 SH3 SH3 SH3
e3j7pU1 U:17-115 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e3j7pV1 V:10-140 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j7pW1 W:1-63 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3j7pX1 X:38-156 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j7pY1 Y:1-134 SH3 SH3 SH3
e3j7pZ1 Z:2-136 SH3 SH3 SH3