Domain ID e3jywY1

Download files:
  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L37e
UID: 000379933
Type: Automatic domain
Parent: e4cuwj1
Range: Y:2-53
PDB: 3jyw
PDB Description:
Hsap BLAST neighbor: P61927
Species:

Structure of domain e3jywY1

Domains in the same chain:

Download Pymol

e3jywY1 Y:2-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e3jyw01 0:27-122 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e3jyw11 1:3-50 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e3jyw21 2:8-105 Bacillus chorismate mutase-like L30e-like L30e-like
e3jyw91 9:11-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3jywA1 A:4-56,A:153-216 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3jywA2 A:57-152 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e3jywC1 C:5-366 cradle loop barrel RIFT-related Alanine racemase-C
e3jywD1 D:5-261 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3jywE3 E:11-123,E:143-247 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3jywF1 F:10-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3jywG1 G:107-219 Bacillus chorismate mutase-like L30e-like L30e-like
e3jywH1 H:6-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3jywH3 H:86-184 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3jywI1 I:4-168 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e3jywJ2 J:2-112,J:132-152 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3jywK2 K:7-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3jywK1 K:74-144 HTH HTH Ribosomal protein L11, C-terminal domain
e3jywL1 L:2-193 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3jywM1 M:7-184 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3jywN1 N:4-153 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3jywO1 O:21-141 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3jywP1 P:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e3jywP2 P:57-177 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e3jywQ1 Q:2-117 SH3 SH3 SH3
e3jywR1 R:7-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3jywS1 S:8-52 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3jywT1 T:60-139 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3jywU1 U:9-124 SH3 SH3 SH3
e3jywW1 W:9-87 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e3jywX1 X:2-66 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3jywY1 Y:2-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3jywZ1 Z:2-93 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e3jywY1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3jyw11 Y:X,Y,Z->1:x,y,z Ribosomal protein L39e Interaction Interface Pymol
e3jywD1 Y:X,Y,Z->D:x,y,z Ribosomal protein L4 Interaction Interface Pymol