Domain ID e3k5lA4

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  • A: alpha bundles
  • X: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • H: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • T: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • F: Unmapped domains
UID: 001779209
Type: Automatic domain
Parent: e1q8iA3
Range: A:638-778
PDB: 3k5l
PDB Description: DNA polymerase II
UniProt: P21189
Species: Escherichia coli

Structure of domain e3k5lA4

Structural contacts of domain e3k5lA4 of H-group ""thumb" domain in bacteriophage RB69-like DNA polymerase I":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1q8iA3 A:-X+1/2,-Y,Z-1/2->A:x,y,z "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3k5lA5 A:X-1,Y,Z->A:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e3k5lA3 A:X-1,Y,Z->A:x,y,z Family B DNA polymerase insertion domain Interaction Interface Pymol
e3k5lA3 A:X-1/2,-Y+1/2,-Z->A:x,y,z Family B DNA polymerase insertion domain Interaction Interface Pymol